BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A01SP1|AL427550
(1046 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1149 1884 0.0
>3x_Contig1149
Length = 5603
Score = 1884 bits (950), Expect = 0.0
Identities = 958/960 (99%), Gaps = 1/960 (0%)
Strand = Plus / Minus
Query: 88 ttacgagtgctatgacccacgctctgtaccttcaatccgaagtctctaatggcacccgat 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5603 ttacgagtgctatgacccacgctctgtaccttcaatccgaagtctctaatggcacccgat 5544
Query: 148 ctcttttttagcttcccacgtccaatacgtctctcgatgtcgttcttgtatgtggactcg 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 ctcttttttagcttcccacgtccaatacgtctctcgatgtcgttcttgtatgtggactcg 5484
Query: 208 atgcgacggaactctccgcgtgatacacgtgac-aacaccgttcctgcgtcacgtgcttc 266
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5483 atgcgacggaactctccgcgtgatacacgtgaccaacaccgttcctgcgtcacgtgcttc 5424
Query: 267 ttgttcgtatttagtgatacgtcccgtatgcttcttgatcatacccttccgtatgttcat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 ttgttcgtatttagtgatacgtcccgtatgcttcttgatcatacccttccgtatgttcat 5364
Query: 327 gggcatcgattcgaggttcttgtgctgcaccgcgttgatctgggacagcgattgaagtct 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 gggcatcgattcgaggttcttgtgctgcaccgcgttgatctgggacagcgattgaagtct 5304
Query: 387 tgtctctagggttctggcacgagccttgccgtgcaattcggaatcgtgtattgtatcttt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 tgtctctagggttctggcacgagccttgccgtgcaattcggaatcgtgtattgtatcttt 5244
Query: 447 gtcagtttggaacgcactgatgagatgcgattcctttaggaaccgttgtaattctatatc 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5243 gtcagtttggaacgcactgatgagatgcgattcctttaggaaccgttgtaattctatatc 5184
Query: 507 gtttcgtaggttgtctctctcctgatcagaatccgagtcagaatctgcagctgcattctg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5183 gtttcgtaggttgtctctctcctgatcagaatccgagtcagaatctgcagctgcattctg 5124
Query: 567 acccgctgtctctaaggctcgtaccgttggggccttcccgcttcgtattaacctttgttc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5123 acccgctgtctctaaggctcgtaccgttggggccttcccgcttcgtattaacctttgttc 5064
Query: 627 tttcttgctaggtttgtattcgttttgttcttcttggaatttaaccactcttggttgtct 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 tttcttgctaggtttgtattcgttttgttcttcttggaatttaaccactcttggttgtct 5004
Query: 687 gacgggttgcttcttttcaggcaagtcttcttcaagatctgactcctctatctcgtcgaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 gacgggttgcttcttttcaggcaagtcttcttcaagatctgactcctctatctcgtcgaa 4944
Query: 747 cccatagaacgatgtgtcagaaccagatgcagactcactttccttctcgtcctctgattc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 cccatagaacgatgtgtcagaaccagatgcagactcactttccttctcgtcctctgattc 4884
Query: 807 agactgactaacattatcgtcatcgtcatcgctatgtgcattcttggtcttgtcctcgaa 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 agactgactaacattatcgtcatcgtcatcgctatgtgcattcttggtcttgtcctcgaa 4824
Query: 867 gcccatgctctccagagtcccaaactgtgcctcaaaggcaagacgctgagcttctagctg 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 gcccatgctctccagagtcccaaactgtgcctcaaaggcaagacgctgagcttctagctg 4764
Query: 927 tttcatatactcgtcgtccatgttgttggagcctgcgatatcttgtttgggtcgagttat 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 tttcatatactcgtcgtccatgttgttggagcctgcgatatcttgtttgggtcgagttat 4704
Query: 987 ttgcatctggkgctgttcatgtgatgaccatgtagagctcatcgcgcatcgaaatttttc 1046
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 ttgcatctggtgctgttcatgtgatgaccatgtagagctcatcgcgcatcgaaatttttc 4644
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5633
Number of Sequences: 1807
Number of extensions: 5633
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 1046
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1030
effective length of database: 10,329,639
effective search space: 10639528170
effective search space used: 10639528170
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)